文件列表:

searchMub.m (1108, 2003-01-08)
calcMub.m (789, 2003-01-08)
calcStatYm.m (614, 2002-10-23)
fcm.m (1466, 2002-01-31)
fcm_calcC.m (601, 2002-01-31)
fcm_calcD.m (625, 2002-01-31)
fcm_calcU.m (896, 2002-01-31)
fcm_dataInitC.m (446, 2002-01-31)
fcm_evalJ.m (455, 2002-01-31)
calcDataDist.m (495, 2003-01-08)

This file describe the content of fcm.ZIP Notations used X = dataset of size (M,N) M = number of experiments N = numbre of genes K = number of clusters mub = upper bound value of the fuzzy parameter file description calcDataDist.m compute the vector of size [N(N-1)/2,1] containing distances between all pair of genes using the dataset (computionally expensive for large N) calcMub.m compute the upper bound value of fuzzy parameter from the dataset calcStatYm.m compute mean, std, cv from the [N(N-1)/2] distances vector fcm.m compute the centroids and the fuzzy partition matrix fcm_calcC.m used by fcm.m fcm_calcD.m used by fcm.m fcm_calcU.m used by fcm.m fcm_dataInitC.m used by fcm.m fcm_evalJ.m used by fcm.m searchMub.m compute the upper bound value of the fuzzy parameter from the [N(N-1)/2,1] vector of distances NB : every function has its own help which can be obtained by typing "help name" where "name" is the function, e.g. "help fcm"

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