Taxonomy
所属分类：生物医药技术
开发工具：Haskell
文件大小：0KB
下载次数：0
上传日期：2021-05-30 14:14:40
上 传 者：
sh-1993
说明： Haskell cabal分类库包含NCBI（国家生物技术中心I...，
(Haskell cabal Taxonomy libary contains tools, parsers, datastructures and visualisation for the NCBI (National Center for Biotechnology Information) Taxonomy datasources.)
文件列表:
.travis.yml (7172, 2021-05-30)
Biobase/ (0, 2021-05-30)
Biobase/Taxonomy.hs (571, 2021-05-30)
Biobase/Taxonomy/ (0, 2021-05-30)
Biobase/Taxonomy/Import.hs (16905, 2021-05-30)
Biobase/Taxonomy/Types.hs (10749, 2021-05-30)
Biobase/Taxonomy/Utils.hs (7855, 2021-05-30)
Biobase/Taxonomy/Visualization.hs (5440, 2021-05-30)
ChangeLog.md (783, 2021-05-30)
LICENSE (35110, 2021-05-30)
Setup.hs (46, 2021-05-30)
Taxonomy.cabal (2454, 2021-05-30)
stack.yaml (165, 2021-05-30)
Taxonomy [](https://hackage.haskell.org/package/Taxonomy) [](https://travis-ci.org/eggzilla/Taxonomy)
=============
Haskell cabal Taxonomy libary contains tools, parsers, datastructures and visualisation
for the NCBI (National Center for Biotechnology Information) Taxonomy datasources.
It can utilize information from the Entrez REST interface (via [EntrezHTTP](https://github.com/eggzilla/EntrezHTTP),
as well as from the files of the Taxonomy database dump.
Input data is parsed into a FGL based datastructure, which enables a wealth of processing
steps like node distances, retrieval of parent nodes or extraction of
subtrees.
Trees can be visualised via dot-format (graphviz) or
via json-format (d3js).
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