文件列表:

ij-plugins (0, 2003-02-09)
ij-plugins\build.xml (4204, 2003-02-09)
ij-plugins\Changes.txt (1815, 2003-02-09)
ij-plugins\lib (0, 2003-02-09)
ij-plugins\lib\ij.jar (533279, 2003-02-09)
ij-plugins\Plugins (0, 2003-02-09)
ij-plugins\Plugins\3D IO (0, 2003-02-09)
ij-plugins\Plugins\3D IO\build.xml (920, 2003-02-09)
ij-plugins\Plugins\3D IO\src (0, 2003-02-09)
ij-plugins\Plugins\3D IO\src\3D IO (0, 2003-02-09)
ij-plugins\Plugins\3D IO\src\3D IO\MetaImage_Reader.java (1664, 2002-08-15)
ij-plugins\Plugins\3D IO\src\3D IO\MetaImage_Writer.java (1638, 2002-08-15)
ij-plugins\Plugins\3D IO\src\3D IO\VTK_Reader.java (1396, 2002-08-15)
ij-plugins\Plugins\3D IO\src\3D IO\VTK_Writer.java (1510, 2002-08-15)
ij-plugins\Plugins\3D Toolkit (0, 2003-02-09)
ij-plugins\Plugins\3D Toolkit\build.xml (978, 2003-02-09)
ij-plugins\Plugins\3D Toolkit\src (0, 2003-02-09)
ij-plugins\Plugins\3D Toolkit\src\3D Toolkit (0, 2003-02-09)
ij-plugins\Plugins\3D Toolkit\src\3D Toolkit\Auto_Clip_Volume.java (2205, 2003-02-08)
ij-plugins\Plugins\3D Toolkit\src\3D Toolkit\Connected_Threshold_Grower.java (3007, 2003-02-08)
ij-plugins\Plugins\3D Toolkit\src\3D Toolkit\Morphological_Dilate_3D.java (1979, 2003-02-08)
ij-plugins\Plugins\3D Toolkit\src\3D Toolkit\Morphological_Erode_3D.java (1972, 2003-02-08)
ij-plugins\Plugins\VTK Filters (0, 2003-02-09)
ij-plugins\Plugins\VTK Filters\build.xml (960, 2003-02-09)
ij-plugins\Plugins\VTK Filters\src (0, 2003-02-09)
ij-plugins\Plugins\VTK Filters\src\VTK Filters (0, 2003-02-09)
ij-plugins\Plugins\VTK Filters\src\VTK Filters\Anisotropic_Diffusion.java (3316, 2003-02-07)
ij-plugins\Plugins\VTK Filters\src\VTK Filters\Continuous_Dilate_3D.java (2878, 2003-02-07)
ij-plugins\Plugins\VTK Filters\src\VTK Filters\Continuous_Erode_3D.java (2872, 2003-02-07)
ij-plugins\Plugins\VTK Filters\src\VTK Filters\Laplacian_.java (1752, 2003-02-07)
ij-plugins\Plugins\VTK Filters\src\VTK Filters\Median_3D.java (2794, 2003-02-07)
ij-plugins\Toolkit (0, 2003-02-09)
ij-plugins\Toolkit\build.xml (1193, 2003-02-09)
ij-plugins\Toolkit\src (0, 2003-02-09)
ij-plugins\Toolkit\src\net (0, 2003-02-09)
ij-plugins\Toolkit\src\net\sf (0, 2003-02-09)
ij-plugins\Toolkit\src\net\sf\ij (0, 2003-02-09)
ij-plugins\Toolkit\src\net\sf\ij\im3d (0, 2003-02-09)
ij-plugins\Toolkit\src\net\sf\ij\im3d\Box3D.java (1541, 2002-08-05)
... ...

------------------------ ij-3D-Toolkit - 2/8/2002 ------------------------ 3D Toolkit is a set of plugins for 3D and 2D operations on images for Image/J ( http://rsb.info.nih.gov/ij/). The toolkit has three groups of plugins: * 3D IO - reading and writing of images in VTK and MetaImage formats * 3D Toolkit - native Java operations on 2D and 3D images * VTK Filters - wrappers for native VTK filters _____ 3D IO ----- 3D IO is a set of plugins reading and writing of images in VTK (www.vtk.org) and MetaImage (www.itk.org) format. All plugins in this set are scriptable using ImageJ macros. __________ 3D Toolkit ---------- * Connected threshold region growing segmentation * Auto volume clipping to a region that contains non-zero pixels * Morphological dilation (max) * Morphological erosion (min) __________ VTK Filter ---------- A set of plugins that allow direct access to VTK image filters from ImageJ. All those filter will work on a single slice image when an image has multiple slices it is assumed that they form a volume (a 3D image). All filters can handle 8 bit, 16 bit, 32 bit integer or float pixel types. Here are some of the available filters, links in the brackets indicate wrapped VTK filter: * Anisotropic diffusion (vtkImageAnisotropicDiffusion3D) * Morphological dilation (vtkImageContinuousDilate3D) * Morphological erosion (vtkImageContinuousErode3D) * Laplacian operator (vtkImageLaplacian) * Median filter (vtkImageMedian3D) Use of vtk filter requires installed version of VTK with Java bindings. Filters were tested with VTK 4.1.1. ____________ INSTALLATION ------------ Following steps assume that you downloaded binary archive ij-3D-Toolkit_bin_0.3.zip or newer from http://ij-plugins.sf.net 1. Follow the link and download latest ij-3D-Toolkit_bin_*.zip 2. Locate your Image/J plugins folder. 3. Remove from Image/J plugins folder sub directories named '3D IO' and '3D Toolkit', if their exist. 4. Unzip content of ij-3D-Toolkit_bin_*.zip into Image/J plugins folder. 5. Add ij-plugins-tookit.jar to Image/J class path. One of the ways to do it is by extending classpath in Image/J startup script, for instance: java -cp ij.jar;plugins/ij-plugins-toolkit.jar ij.ImageJ 6. To use VTK filters add path to VTK Java classes typically located in vtk.jar. VTK binaries and source code are available from www.vtk.org. 7. Restart Image/J. ______ SOURCE ------ The source code consist two components: * Toolkit - library containing implementation of all classes responsible for plugins functionality. * Plugins - plugin loaders that interface the Toolkit to Image/J. Each subproject within Plugins directory corresponds to a some functional grouping of plugins. Each of those groupings is intended to show up as a sub-menu in Image/J plugins menu. Binaries can be build from the source code using the build file (build.xml) for Ant build tool ( http://jakarta.apache.org/ant/). Building of complete release requires VTK Java classes. Classpath to VTK needs to be specified either at command prompt (property 'vtk.classpath') or by editing the main class path. ___________________ CONTACT INFORMATION ------------------- Author : Jarek Sacha E-mail : jsacha@users.sourceforge.net Webpage: http://ij-plugins.sourceforge.net/

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