api-examples
所属分类:
生物技术
开发工具:Python
文件大小:1706KB
下载次数:0
上传日期:2022-12-08 15:42:28
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sh-1993
说明: api示例,显示如何通过python与Pipe|bio RESTapi交互的示例。
(api-examples,Examples showing how to interact with the Pipe|bio REST api through python.)
文件列表:
.env.example (81, 2023-05-11)
.github (0, 2023-05-11)
.github\workflows (0, 2023-05-11)
.github\workflows\main.yml (1219, 2023-05-11)
.gitignore (67, 2023-05-11)
.idea (0, 2023-05-11)
.idea\.gitignore (176, 2023-05-11)
.idea\misc.xml (274, 2023-05-11)
.idea\modules.xml (268, 2023-05-11)
.idea\vcs.xml (167, 2023-05-11)
Downloads (0, 2023-05-11)
Downloads\.gitkeep (0, 2023-05-11)
LICENSE (1507, 2023-05-11)
__init__.py (0, 2023-05-11)
bin (0, 2023-05-11)
bin\install.sh (31, 2023-05-11)
bin\run-tests.sh (30, 2023-05-11)
example_01_upload_example.py (4411, 2023-05-11)
example_02_download_example.py (3710, 2023-05-11)
example_03_cluster_example.py (2270, 2023-05-11)
example_itest.py (9496, 2023-05-11)
pipebio-client.iml (577, 2023-05-11)
pytest.ini (34, 2023-05-11)
requirements.txt (28, 2023-05-11)
sample_data (0, 2023-05-11)
sample_data\adimab (0, 2023-05-11)
sample_data\adimab\137_adimab_VH.fsa (53203, 2023-05-11)
sample_data\adimab\137_adimab_VL.fsa (48650, 2023-05-11)
sample_data\adimab\944.full.pdf (1816414, 2023-05-11)
sample_data\upload.tsv (52361, 2023-05-11)
[](https://github.com/pipebio/api-examples/actions/workflows/main.yml)
# API Examples
- Examples showing how to interact with the Pipe|bio REST api through python.
- See [https://docs.pipebio.com](https://docs.pipebio.com) for full API documentation.
- Examples currently wrap our API endpoints in python only, you can of course use the endpoints in any language (java, javascript, c#, etc)
- All endpoints are under heavy development and subject to change. Use at your own risk.
## Installation
- [Python3](https://wsvincent.com/install-python3-mac/) or just `brew install python@3.7`
- Virtualenv: `pip3 install virtualenv`
- Create a virtual environment: `virtualenv -p python3 venv`
- Activate the venv: `source venv/bin/activate`
- Install dependencies: `pip install -r requirements.txt`
## Getting started
- Check out the files with names like `example*.py`; to run them use `python example_01_upload_example.py` for example.
- To ensure these files are up to date and really work, we have integration tests running in `example_itest.py`.
- Please contact owen@pipebio.com for help.
## Contributing
- Issues and pull requests are welcome.
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